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The 2022 Galaxy Community Conference (GCC2022) brings together hundreds of researchers, trainers, tool developers, software engineers, and  computational infrastructure providers, all addressing common challenges in data intensive science using the Galaxy data integration and analysis platform.

  • July 17-23, 2022
  • University of Minnesota, Twin Cities
  • Minneapolis, Minnesota, United States

This annual gathering of the Galaxy community includes training, talks, posters, demos, Birds of a Feather meetups, and many other opportunities for collaboration and networking. GCC2022 will be an in-person meeting with limited support for remote attendees. There is no better event than GCC2022 to share your work and learn form others working in data-intensive science.

Click HERE to Register!
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B. Talks [clear filter]
Sunday, July 17
 

11:19am CDT

Session 3: Accepted and Invited Talks
More accepted and invited talks.

This session will also be broadcast live to remote participants.


Moderators
avatar for John Davis

John Davis

Software Engineer, Galaxy Project, Johns Hopkins University

Sunday July 17, 2022 11:19am - 12:20pm CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:20am CDT

Galaxy as a (Science) Gateway to the Command Line
Carrie Ganote, Indiana University
Irene Newton, Indiana University

⇒ Abstract
Speakers
avatar for Carrie Ganote

Carrie Ganote

Indiana University Bloomington

ganotegalaxytalk2022 pdf
Sunday July 17, 2022 11:20am - 11:27am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:27am CDT

Decentralized Remote Data Handling in Galaxy
John Chilton, Galaxy Project
Marius van den Beek, Galaxy Project

⇒ Abstract
Speakers
avatar for John Chilton

Sunday July 17, 2022 11:27am - 11:42am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:42am CDT

GA4GH Task Execution Schema Support in Galaxy
Vipul Chhabra
Alex Kanitz, University of Basel
Kyle Ellrott, Oregon Health and Science University

⇒ Abstract
Speakers
KE

Sunday July 17, 2022 11:42am - 11:49am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:49am CDT

Galaxy Storage Dashboard
Galaxy UI/UX working group

David Lopez, University of Freiburg

​⇒ Abstract​​​
Speakers
avatar for Dannon Baker

Dannon Baker

Galaxy Project, Johns Hopkins University
Talk to me about Galaxy Development, especially the UI!

Sunday July 17, 2022 11:49am - 11:56am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:56am CDT

Galaxy History Scaling and Modernization
Aysam Guerler, Johns Hopkins University
David López, University of Freiburg
Dannon Baker, Johns Hopkins University
Galaxy UI/UX Working Group

​⇒ Abstract​​​
Speakers
avatar for Aysam Guerler

Aysam Guerler

Galaxy Project, Johns Hopkins University
Johns Hopkins University

Sunday July 17, 2022 11:56am - 12:11pm CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

12:11pm CDT

Automating Galaxy Tool Benchmarks
Keith Suderman, Johns Hopkins University
Bridget Carr, Johns Hopkins University
Peyuan Xu, Johns Hopkins University
Victor Wen, Johns Hopkins University
Nuwan Goonasekera, University of Melbourne
Michael Schatz, Johns Hopkins University
Enis Afgan, Johns Hopkins University

​⇒ Abstract​​​
Speakers
avatar for Keith Suderman

Keith Suderman

Software Engineer, Johns Hopkins University

Automated Benchmarking GCC2022 pptx
Sunday July 17, 2022 12:11pm - 12:18pm CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev
 
Tuesday, July 19
 

11:19am CDT

Session 15: Accepted and Invited Talks
More accepted and invited talks.

This session will also be broadcast live to remote participants.


Moderators
CB

Catherine Bromhead

University of Melbourne

Tuesday July 19, 2022 11:19am - 12:20pm CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:20am CDT

What's New in the API
Marius van den Beek, PSU
David López, University of Freiburg
​

⇒ Abstract​​​
Speakers
MV

Tuesday July 19, 2022 11:20am - 11:27am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:27am CDT

Support for the Common Workflow Language in Galaxy: History, Progress and Remaining Challenges
Nicola Soranzo, Earlham Institute, Norwich Research Park, Norwich, NR4 7UZ, UK
Marius van den Beek, Department of Biochemistry & Molecular Biology, The Pennsylvania State University, University Park, PA, USA
Michael R. Crusoe, VU Amsterdam and ELIXIR-NL
John Chilton, Department of Biochemistry & Molecular Biology, The Pennsylvania State University, University Park, PA, USA

​⇒ Abstract​​​
Presentation
Speakers
avatar for Michael R. Crusoe

Michael R. Crusoe

ELIXIR-NL & ELIXIR-DE
Workflows!Standards!ELIXIR!
avatar for Nicola Soranzo

Nicola Soranzo

Earlham Institute

Tuesday July 19, 2022 11:27am - 11:42am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:42am CDT

Accelerating Galaxy with Task Queues
Marius van den Beek, PSU
John Chilton, PSU

​⇒ Abstract​​​
Speakers
avatar for John Chilton

Tuesday July 19, 2022 11:42am - 11:49am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:49am CDT

Securely Storing Sensitive User Preferences in Galaxy
Nuwan Goonasekera, University of Melbourne
Isuru Ranawaka, Indiana University
Enis Afgan, Johns Hopkins University

​⇒ Abstract​​​
Speakers
NG

Tuesday July 19, 2022 11:49am - 11:56am CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

11:56am CDT

Galaxy’s New Database Migration System and Data Model Testing Infrastructure
John Davis, Johns Hopkins University

⇒ Abstract
Speakers
avatar for John Davis

John Davis

Software Engineer, Galaxy Project, Johns Hopkins University

galaxy database migration system GCC 2022 pdf
Tuesday July 19, 2022 11:56am - 12:11pm CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev

12:11pm CDT

Robust, Performant and Resumable Uploads Using tus.io
Marius van den Beek, Penn State University

​⇒ Abstract​​​
Speakers
MV

Tuesday July 19, 2022 12:11pm - 12:18pm CDT
Salon ABCD Room Courtyard Minneapolis Downtown,1500 Washington Avenue South, Minneapolis, Minnesota, USA, 55454
  B. Talks, Dev
 
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